It has come to light that the original logo in 2004 was a Koffing with a Swastika instead of the normal crossbones thing
https://www.youtube.com/watch?v=lPG6vIN8Kx8
Video by cecilily - We need to talk about the Nazi past of Smogon
This is so outrageous it seems fake, but they adressed it last year and decided not to change the name which is peak 
Good video, worth a watch if are invested in the community. At the end she argues that the site has changed, and cites the presence of a diverse community as evidence of that. Personally I am not going to use the site anymore because I am concerned about the ideology of the hosts and admins. If Smogon was and potentially still is a safe harbor for antisemitic behavior it will never be a safe space for any minority group. The logo is still a koffing, they just got rid of the swastika.